BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C02SP1|AL428865
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1718 1754 0.0
3x_Contig105 639 0.0
>3x_Contig1718
Length = 19496
Score = 1754 bits (881), Expect = 0.0
Identities = 899/908 (99%), Gaps = 1/908 (0%)
Strand = Plus / Plus
Query: 1 gatcaggcccagaatgggaatcaaggttcggaacagaaagattagatgatgacaggtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6292 gatcaggcccagaatgggaatcaaggttcggaacagaaagattagatgatgacaggtctc 6351
Query: 61 ctgttctatgtccagattttcttattgagacttacctggatcaccaaggggagaagtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6352 ctgttctatgtccagattttcttattgagacttacctggatcaccaaggggagaagtttt 6411
Query: 121 ccttagaatatgacgcaaactcattcttatacatttcaaagacgatggatttattcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6412 ccttagaatatgacgcaaactcattcttatacatttcaaagacgatggatttattcagct 6471
Query: 181 tatcaaagtccgaccaagagcgca-ccagaaacgaagattgcmaagtcaaagagattttg 239
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 6472 tatcaaagtccgaccaagagcgcagccagaaacgaagattgcaaagtcaaagagattttg 6531
Query: 240 aaagtggtgttttgccttcgtcaaggctgccggatgagccatacaagtataagaaaagac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6532 aaagtggtgttttgccttcgtcaaggctgccggatgagccatacaagtataagaaaagac 6591
Query: 300 ggagaacaacaacgatagaagaaagcagaaaagatctcgaagcggggatgactcaacttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6592 ggagaacaacaacgatagaagaaagcagaaaagatctcgaagcggggatgactcaacttc 6651
Query: 360 tagataaagatatcttggtgattggtgttaagacagactccctcttcccgtattggcaac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6652 tagataaagatatcttggtgattggtgttaagacagactccctcttcccgtattggcaac 6711
Query: 420 aaagagagattgttgaacttttaaagggaccgaacgataatgtgacacatgttgaattag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6712 aaagagagattgttgaacttttaaagggaccgaacgataatgtgacacatgttgaattag 6771
Query: 480 acgagaatgcgtcattgtacggacacgatactttccttctagatttagaaatagtcggat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6772 acgagaatgcgtcattgtacggacacgatactttccttctagatttagaaatagtcggat 6831
Query: 540 cgagcataggcaaattcctccgtgatcagctataaaccaaagattgtgcataaatttata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6832 cgagcataggcaaattcctccgtgatcagctataaaccaaagattgtgcataaatttata 6891
Query: 600 tagacaactttttttaatttgatacgactgcmttagcgttattccttactttgttttcat 659
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6892 tagacaactttttttaatttgatacgactgcattagcgttattccttactttgttttcat 6951
Query: 660 aattatgamatgtgaagtatgtntatatathccagagtagcagattctgctacaaatmat 719
|||||||| ||||||||||||| ||||||| | |||||||||||||||||||||||| ||
Sbjct: 6952 aattatgaaatgtgaagtatgtatatatatacaagagtagcagattctgctacaaataat 7011
Query: 720 amacgaagatcattttgaagcgtatggaaatatatctatcgttttcgttttcggcatttt 779
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7012 aaacgaagatcattttgaagcgtatggaaatatatctatcgttttcgttttcggcatttt 7071
Query: 780 caattcctatagtattcttttaaaatctattgctcggaactgaacattttttccttacga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7072 caattcctatagtattcttttaaaatctattgctcggaactgaacattttttccttacga 7131
Query: 840 gcagccttacgcttagcatcggcaaccttattcgaatccttaatcaaaataacatcaccg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7132 gcagccttacgcttagcatcggcaaccttattcgaatccttaatcaaaataacatcaccg 7191
Query: 900 aagaattt 907
||||||||
Sbjct: 7192 aagaattt 7199
>3x_Contig105
Length = 870
Score = 639 bits (321), Expect = 0.0
Identities = 371/390 (95%), Gaps = 1/390 (0%)
Strand = Plus / Minus
Query: 519 tagatttagaaatagtcggatcgagcataggcaaattcctccgtgatcagctataaacca 578
|||||||||||||||| |||| ||| ||||| ||||| | ||||| || |||||| ||
Sbjct: 455 tagatttagaaatagtgggatggaggatagggaaattggtgggtgatgaggtataaagca 396
Query: 579 aagattgtgcataaatttatatagacaactttttttaatttgatacgactgcmttagcgt 638
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 395 aagattgtgcataaatttatatagacaactttttttaatttgatacgactgcattagcgt 336
Query: 639 tattccttactttgttttcataattatgamatgtgaagtatgtntatatathccagagta 698
||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||||||
Sbjct: 335 tattccttactttgttttcataattatgaaatgtgaagtatgtatatatatacaagagta 276
Query: 699 gcagattctgctacaaatmatamacgaagatcattttgaagcgtatggaaatatatctat 758
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcagattctgctacaaataataaacgaagatcattttgaagcgtatggaaatatatctat 216
Query: 759 cgttttcgttttcggcattttcaattcctatagtattcttttaaaatctattgctcggaa 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 cgttttcgttttcggcattttcaattcctatagtattcttttaaaatctattgctcggaa 156
Query: 819 ctgaacattttttccttacgagcagccttacgcttagcatcggcaaccttattcgaatc- 877
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 ctgaacattttttccttacgagcagccttacgcttagcatcggcaaccttattcgaatcg 96
Query: 878 cttaatcaaaataacatcaccgaagaattt 907
||||||||||||||||||||||||||||||
Sbjct: 95 cttaatcaaaataacatcaccgaagaattt 66
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6695
Number of Sequences: 1807
Number of extensions: 6695
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 2
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)